| DNA |
Counting DNA Nucleotides |
| RNA |
Transcribing DNA into RNA |
| REVC |
Complementing a Strand of DNA |
| FIB |
Rabbits and Recurrence Relations |
| GC |
Computing GC Content |
| HAMM |
Counting Point Mutations |
| IPRB |
Mendel's First Law |
| PROT |
Translating RNA into Protein |
| SUBS |
Finding a Motif in DNA |
| CONS |
Consensus and Profile |
| FIBD |
Mortal Fibonacci Rabbits |
| GRPH |
Overlap Graphs |
| IEV |
Calculating Expected Offspring |
| LCSM |
Finding a Shared Motif |
| LIA |
Independent Alleles |
| MPRT |
Finding a Protein Motif |
| MRNA |
Inferring mRNA from Protein |
| ORF |
Open Reading Frames |
| PERM |
Enumerating Gene Orders |
| PRTM |
Calculating Protein Mass |
| REVP |
Locating Restriction Sites |
| SPLC |
RNA Splicing |
| LEXF |
Enumerating k-mers Lexicographically |
| LGIS |
Longest Increasing Subsequence |
| LONG |
Genome Assembly as Shortest Superstring |
| PMCH |
Perfect Matchings and RNA Secondary Structures |
| PPER |
Partial Permutations |
| PROB |
Introduction to Random Strings |
| SIGN |
Enumerating Oriented Gene Orderings |
| SSEQ |
Finding a Spliced Motif |
| TRAN |
Transitions and Transversions |
| TREE |
Completing a Tree |
| CAT |
Catalan Numbers and RNA Secondary Structures |
| CORR |
Error Correction in Reads |
| INOD |
Counting Phylogenetic Ancestors |
| KMER |
k-Mer Composition |
| KMP |
Speeding Up Motif Finding |
| LCSQ |
Finding a Shared Spliced Motif |
| LEXV |
Ordering Strings of Varying Length
Lexicographically |
| MMCH |
Maximum Matchings and RNA Secondary Structures |
| PDST |
Creating a Distance Matrix |
| REAR |
Reversal Distance |
| RSTR |
Matching Random Motifs |
| SSET |
Counting Subsets |
| ASPC |
Introduction to Alternative Splicing |
| EDIT |
Edit Distance |
| EVAL |
Expected Number of Restriction Sites |
| MOTZ |
Motzkin Numbers and RNA Secondary Structures |
| NWCK |
Distances in Trees |
| SCSP |
Interleaving Two Motifs |
| SETO |
Introduction to Set Operations |
| SORT |
Sorting by Reversals |
| SPEC |
Inferring Protein from Spectrum |
| TRIE |
Introduction to Pattern Matching |
| CONV |
Comparing Spectra with the Spectral Convolution
|
| CTBL |
Creating a Character Table |
| DBRU |
Constructing a De Bruijn Graph |
| EDTA |
Edit Distance Alignment |
| FULL |
Inferring Peptide from Full Spectrum |
| INDC |
Independent Segregation of Chromosomes |
| ITWV |
Finding Disjoint Motifs in a Gene |
| LREP |
Finding the Longest Multiple Repeat |
| NKEW |
Newick Format with Edge Weights |
| RNAS |
Wobble Bonding and RNA Secondary Structures |
| AFRQ |
Counting Disease Carriers |
| CSTR |
Creating a Character Table from Genetic Strings
|
| CTEA |
Counting Optimal Alignments |
| CUNR |
Counting Unrooted Binary Trees |
| GLOB |
Global Alignment with Scoring Matrix |
| PCOV |
Genome Assembly with Perfect Coverage |
| PRSM |
Matching a Spectrum to a Protein |
| QRT |
Quartets |
| SGRA |
Using the Spectrum Graph to Infer Peptides |
| SUFF |
Encoding Suffix Trees |
| CHBP |
Character-Based Phylogeny |
| CNTQ |
Counting Quartets |
| EUBT |
Enumerating Unrooted Binary Trees |
| GASM |
Genome Assembly Using Reads |
| GCON |
Global Alignment with Constant Gap Penalty |
| LING |
Linguistic Complexity of a Genome |
| LOCA |
Local Alignment with Scoring Matrix |
| MEND |
Inferring Genotype from a Pedigree |
| MGAP |
Maximizing the Gap Symbols of an Optimal Alignment
|
| MREP |
Identifying Maximal Repeats |
| MULT |
Multiple Alignment |
| PDPL |
Creating a Restriction Map |
| ROOT |
Counting Rooted Binary Trees |
| SEXL |
Sex-Linked Inheritance |
| SPTD |
Phylogeny Comparison with Split Distance |
| WFMD |
The Wright-Fisher Model of Genetic Drift |
| ALPH |
Alignment-Based Phylogeny |
| ASMQ |
Assessing Assembly Quality with N50 and N75 |
| CSET |
Fixing an Inconsistent Character Set |
| EBIN |
Wright-Fisher's Expected Behavior |
| FOUN |
The Founder Effect and Genetic Drift |
| GAFF |
Global Alignment with Scoring Matrix and Affine Gap
Penalty |
| GREP |
Genome Assembly with Perfect Coverage and Repeats
|
| OAP |
Overlap Alignment |
| QRTD |
Quartet Distance |
| SIMS |
Finding a Motif with Modifications |
| SMGB |
Semiglobal Alignment |
| KSIM |
Finding All Similar Motifs |
| LAFF |
Local Alignment with Affine Gap Penalty |
| OSYM |
Isolating Symbols in Alignments |
| RSUB |
Identifying Reversing Substitutions |